STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDX73450.1Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. (347 aa)    
Predicted Functional Partners:
EDX77542.1
Nucleotidyl transferase family; [MJ] COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon).
  
 0.653
EDX73962.1
Hypothetical protein; [R] COG0637 Predicted phosphatase/phosphohexomutase.
  
 0.608
EDX73568.1
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
 
  0.579
murB-2
FAD binding domain protein; Cell wall formation.
       0.574
EDX73608.1
Glycosyl transferase, group 1 family protein; [M] COG0438 Glycosyltransferase.
       0.566
EDX76611.1
Alpha amylase, catalytic domain subfamily, putative; [G] COG0366 Glycosidases.
    
 0.549
EDX72627.1
Alpha amylase, catalytic domain subfamily, putative; [G] COG0366 Glycosidases.
    
 0.511
EDX76734.1
[R] COG1073 Hydrolases of the alpha/beta superfamily.
    
   0.487
EDX77108.1
Hypothetical protein; [R] COG1073 Hydrolases of the alpha/beta superfamily.
    
   0.487
EDX71175.1
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
    
   0.487
Your Current Organism:
Coleofasciculus chthonoplastes
NCBI taxonomy Id: 118168
Other names: C. chthonoplastes PCC 7420, Coleofasciculus chthonoplastes PCC 7420, Microcoleus chthonoplastes PCC 7420, Microcoleus sp. PCC 7420
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