STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDX73495.1Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. (76 aa)    
Predicted Functional Partners:
EDX73597.1
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
       0.779
EDX73541.1
Hypothetical protein; [S] COG3937 Uncharacterized conserved protein.
       0.578
EDX72582.1
Beta-ketoacyl synthase, N-terminal domain protein; [Q] COG3321 Polyketide synthase modules and related proteins.
  
 
 0.569
EDX74401.1
Ferrochelatase; [H] COG0276 Protoheme ferro-lyase (ferrochelatase); Belongs to the ferrochelatase family.
    
  0.537
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
    
  0.537
EDX71337.1
Ferritin-like domain subfamily; [P] COG0783 DNA-binding ferritin-like protein (oxidative damage protectant).
     
 0.523
EDX78371.1
Ferritin-like domain subfamily; [S] COG1633 Uncharacterized conserved protein.
     
 0.523
EDX73462.1
[O] COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1.
       0.486
EDX77648.1
Nitrogenase cofactor biosynthesis protein NifB; [R] COG0535 Predicted Fe-S oxidoreductases.
    
  0.464
EDX77687.1
Dinitrogenase iron-molybdenum cofactor domain protein; [R] COG0535 Predicted Fe-S oxidoreductases.
    
  0.464
Your Current Organism:
Coleofasciculus chthonoplastes
NCBI taxonomy Id: 118168
Other names: C. chthonoplastes PCC 7420, Coleofasciculus chthonoplastes PCC 7420, Microcoleus chthonoplastes PCC 7420, Microcoleus sp. PCC 7420
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