STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDX74278.1Hypothetical protein. (477 aa)    
Predicted Functional Partners:
EDX74393.1
Hypothetical protein.
       0.581
EDX76541.1
[S] COG1479 Uncharacterized conserved protein.
  
     0.535
EDX78668.1
SLEI family; [R] COG0457 FOG: TPR repeat.
  
     0.504
EDX78362.1
Bacterial SH3 domain family; [M] COG0860 N-acetylmuramoyl-L-alanine amidase.
  
     0.467
EDX74747.1
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.441
EDX75337.1
N-6 DNA Methylase family; [V] COG1002 Type II restriction enzyme, methylase subunits.
  
     0.440
EDX73727.1
Hypothetical protein.
  
     0.439
EDX74486.1
Hypothetical protein.
       0.437
EDX74153.1
Site-specific recombinase, phage integrase family protein; [L] COG0582 Integrase.
  
     0.435
EDX73581.1
Hypothetical protein; [D] COG1196 Chromosome segregation ATPases; M protein repeat.
  
     0.432
Your Current Organism:
Coleofasciculus chthonoplastes
NCBI taxonomy Id: 118168
Other names: C. chthonoplastes PCC 7420, Coleofasciculus chthonoplastes PCC 7420, Microcoleus chthonoplastes PCC 7420, Microcoleus sp. PCC 7420
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.