STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDX71096.1Putative integral membrane protein TIGR02587; [S] COG4711 Predicted membrane protein. (292 aa)    
Predicted Functional Partners:
EDX71132.1
Conserved hypothetical protein TIGR02588; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
 
     0.887
EDX71755.1
Hypothetical protein; [O] COG0465 ATP-dependent Zn proteases.
  
     0.659
EDX70644.1
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.644
EDX72600.1
Transporter, CPA2 family; [P] COG0025 NhaP-type Na+/H+ and K+/H+ antiporters.
  
     0.589
EDX71101.1
TrkA-C domain protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
 
     0.558
EDX78479.1
[S] COG3011 Uncharacterized protein conserved in bacteria.
  
     0.558
EDX70551.1
[S] COG4636 Uncharacterized protein conserved in cyanobacteria.
  
     0.549
EDX77849.1
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.532
EDX75276.1
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.520
EDX74065.1
Hypothetical protein; [U] COG3505 Type IV secretory pathway, VirD4 components.
  
     0.503
Your Current Organism:
Coleofasciculus chthonoplastes
NCBI taxonomy Id: 118168
Other names: C. chthonoplastes PCC 7420, Coleofasciculus chthonoplastes PCC 7420, Microcoleus chthonoplastes PCC 7420, Microcoleus sp. PCC 7420
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