EDX73161.1 protein (Coleofasciculus chthonoplastes)

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second shell of interactors

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Known Interactions

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Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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Score

EDX73161.1

Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. (306 aa)

Predicted Functional Partners:

EDX73164.1

0.987

EDX72859.1

0.730

EDX72822.1

0.727

EDX72909.1

0.718

EDX72778.1

0.705

EDX72823.1

0.675

EDX72868.1

0.668

EDX76512.1

0.618

EDX77631.1

0.555

EDX72107.1

0.521

Your Current Organism:

Coleofasciculus chthonoplastes

NCBI taxonomy Id: 118168
Other names: C. chthonoplastes PCC 7420, Coleofasciculus chthonoplastes PCC 7420, Microcoleus chthonoplastes PCC 7420, Microcoleus sp. PCC 7420

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EDX72107.1	EDX72868.1	MC7420_7587	MC7420_3314	Hypothetical protein; [L] COG0863 DNA modification methylase.	CRISPR-associated RAMP protein, SSO1426 family; [L] COG1337 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily).	0.425
EDX72107.1	EDX73161.1	MC7420_7587	MC7420_4408	Hypothetical protein; [L] COG0863 DNA modification methylase.	Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.	0.521
EDX72778.1	EDX72822.1	MC7420_3224	MC7420_3268	CRISPR-associated RAMP protein; [L] COG1337 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily).	CRISPR-associated RAMP protein; [L] COG1337 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily).	0.792
EDX72778.1	EDX72823.1	MC7420_3224	MC7420_3269	CRISPR-associated RAMP protein; [L] COG1337 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily).	Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.	0.862
EDX72778.1	EDX72859.1	MC7420_3224	MC7420_3305	CRISPR-associated RAMP protein; [L] COG1337 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily).	CRISPR-associated protein, Crm2 family, putative; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.	0.960
EDX72778.1	EDX72868.1	MC7420_3224	MC7420_3314	CRISPR-associated RAMP protein; [L] COG1337 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily).	CRISPR-associated RAMP protein, SSO1426 family; [L] COG1337 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily).	0.580
EDX72778.1	EDX72909.1	MC7420_3224	MC7420_3355	CRISPR-associated RAMP protein; [L] COG1337 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily).	CRISPR-associated RAMP protein, Csx10 family; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.	0.792
EDX72778.1	EDX73161.1	MC7420_3224	MC7420_4408	CRISPR-associated RAMP protein; [L] COG1337 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily).	Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.	0.705
EDX72778.1	EDX73164.1	MC7420_3224	MC7420_4411	CRISPR-associated RAMP protein; [L] COG1337 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily).	Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.	0.625
EDX72778.1	EDX77631.1	MC7420_3224	MC7420_2955	CRISPR-associated RAMP protein; [L] COG1337 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily).	GTPase, putative; [R] COG1163 Predicted GTPase.	0.489
EDX72822.1	EDX72778.1	MC7420_3268	MC7420_3224	CRISPR-associated RAMP protein; [L] COG1337 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily).	CRISPR-associated RAMP protein; [L] COG1337 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily).	0.792
EDX72822.1	EDX72823.1	MC7420_3268	MC7420_3269	CRISPR-associated RAMP protein; [L] COG1337 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily).	Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.	0.791
EDX72822.1	EDX72859.1	MC7420_3268	MC7420_3305	CRISPR-associated RAMP protein; [L] COG1337 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily).	CRISPR-associated protein, Crm2 family, putative; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.	0.990
EDX72822.1	EDX72909.1	MC7420_3268	MC7420_3355	CRISPR-associated RAMP protein; [L] COG1337 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily).	CRISPR-associated RAMP protein, Csx10 family; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.	0.951
EDX72822.1	EDX73161.1	MC7420_3268	MC7420_4408	CRISPR-associated RAMP protein; [L] COG1337 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily).	Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.	0.727
EDX72822.1	EDX73164.1	MC7420_3268	MC7420_4411	CRISPR-associated RAMP protein; [L] COG1337 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily).	Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.	0.645
EDX72822.1	EDX77631.1	MC7420_3268	MC7420_2955	CRISPR-associated RAMP protein; [L] COG1337 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily).	GTPase, putative; [R] COG1163 Predicted GTPase.	0.584
EDX72823.1	EDX72778.1	MC7420_3269	MC7420_3224	Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.	CRISPR-associated RAMP protein; [L] COG1337 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily).	0.862
EDX72823.1	EDX72822.1	MC7420_3269	MC7420_3268	Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.	CRISPR-associated RAMP protein; [L] COG1337 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily).	0.791
EDX72823.1	EDX72859.1	MC7420_3269	MC7420_3305	Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.	CRISPR-associated protein, Crm2 family, putative; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.	0.958

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Network Stats

number of nodes:

11

number of edges:

26

average node degree:

4.73

avg. local clustering coefficient:

0.738

expected number of edges:

19

PPI enrichment p-value:

0.0794

your network does not have significantly more
interactions than expected (what does that mean?)

Functional enrichments in your networkNote: some enrichments may be expected here (why?)
disable highlight explain columns

Biological Process (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0000160

Phosphorelay signal transduction system

2 of 5

2.66

0.75

0.0442

Molecular Function (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0001228

DNA-binding transcription activator activity, RNA polymerase II-specific

2 of 9

2.41

0.73

0.0472

Local Network Cluster (STRING)

cluster

description

count in network

strength

signal

false discovery rate

CL:1766

Mostly uncharacterized, incl. Tubulin/FtsZ-like, C-terminal domain, and Small GTPase Rho

5 of 24

2.38

3.78

3.42e-08

CL:1767

Mostly uncharacterized, incl. Small GTPase Rho, and KN motif and ankyrin repeat domain-containing protein 1-4

4 of 19

2.38

3.21

5.78e-07

CL:1769

Mostly uncharacterized, incl. KN motif and ankyrin repeat domain-containing protein 1-4, and Meprin and TRAF homology

3 of 11

2.5

2.01e-05

CL:1744

Mixed, incl. RHO GTPase cycle, and Actin cytoskeleton

6 of 157

1.64

2.39

5.17e-07

CL:8659

Phosphorelay signal transduction system

2 of 5

2.66

1.55

0.0015

(more ...)

KEGG Pathways

pathway

description

count in network

strength

signal

false discovery rate

map05134

Legionellosis

2 of 14

2.22

1.04

0.0114

Annotated Keywords (UniProt)

keyword

description

count in network

strength

signal

false discovery rate

KW-0597

Phosphoprotein

2 of 7

2.52

1.25

0.0052

Protein Domains and Features (InterPro)

domain

description

count in network

strength

signal

false discovery rate

IPR014402

Transcription factor, Skn7-like

2 of 2

3.06

1.08

0.0112

IPR011006

CheY-like superfamily

2 of 5

2.66

0.94

0.0196

IPR001789

Signal transduction response regulator, receiver domain

2 of 5

2.66

0.94

0.0196

IPR027725

Heat shock transcription factor family

2 of 8

2.46

0.92

0.0210

IPR000232

Heat shock factor (HSF)-type, DNA-binding

2 of 8

2.46

0.92

0.0210

Protein Domains (SMART)

domain

description

count in network

strength

signal

false discovery rate

SM00448

cheY-homologous receiver domain

2 of 4

2.76

1.36

0.0034

SM00415

Heat shock factor

2 of 8

2.46

1.25

0.0051

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