Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EDX77116.1 | EDX77315.1 | MC7420_253 | MC7420_452 | Phytanoyl-CoA dioxygenase family; [Q] COG5285 Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin. | Hypothetical protein. | 0.402 |
EDX77116.1 | EDX77377.1 | MC7420_253 | MC7420_514 | Phytanoyl-CoA dioxygenase family; [Q] COG5285 Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin. | Oxidoreductase, short chain dehydrogenase/reductase family; [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases). | 0.766 |
EDX77116.1 | EDX77472.1 | MC7420_253 | MC7420_609 | Phytanoyl-CoA dioxygenase family; [Q] COG5285 Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin. | Hypothetical protein. | 0.645 |
EDX77163.1 | EDX77315.1 | MC7420_300 | MC7420_452 | S-layer domain protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. | Hypothetical protein. | 0.529 |
EDX77315.1 | EDX77116.1 | MC7420_452 | MC7420_253 | Hypothetical protein. | Phytanoyl-CoA dioxygenase family; [Q] COG5285 Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin. | 0.402 |
EDX77315.1 | EDX77163.1 | MC7420_452 | MC7420_300 | Hypothetical protein. | S-layer domain protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. | 0.529 |
EDX77315.1 | EDX77377.1 | MC7420_452 | MC7420_514 | Hypothetical protein. | Oxidoreductase, short chain dehydrogenase/reductase family; [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases). | 0.434 |
EDX77315.1 | EDX77472.1 | MC7420_452 | MC7420_609 | Hypothetical protein. | Hypothetical protein. | 0.470 |
EDX77377.1 | EDX77116.1 | MC7420_514 | MC7420_253 | Oxidoreductase, short chain dehydrogenase/reductase family; [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases). | Phytanoyl-CoA dioxygenase family; [Q] COG5285 Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin. | 0.766 |
EDX77377.1 | EDX77315.1 | MC7420_514 | MC7420_452 | Oxidoreductase, short chain dehydrogenase/reductase family; [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases). | Hypothetical protein. | 0.434 |
EDX77377.1 | EDX77472.1 | MC7420_514 | MC7420_609 | Oxidoreductase, short chain dehydrogenase/reductase family; [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases). | Hypothetical protein. | 0.705 |
EDX77472.1 | EDX77116.1 | MC7420_609 | MC7420_253 | Hypothetical protein. | Phytanoyl-CoA dioxygenase family; [Q] COG5285 Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin. | 0.645 |
EDX77472.1 | EDX77315.1 | MC7420_609 | MC7420_452 | Hypothetical protein. | Hypothetical protein. | 0.470 |
EDX77472.1 | EDX77377.1 | MC7420_609 | MC7420_514 | Hypothetical protein. | Oxidoreductase, short chain dehydrogenase/reductase family; [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases). | 0.705 |