STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDX76308.1Auxiliary transport protein, MFP family; [M] COG0845 Membrane-fusion protein. (518 aa)    
Predicted Functional Partners:
EDX76520.1
ABC-type bacteriocin transporter subfamily, putative; [V] COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain.
 0.974
EDX76304.1
Peptidase, C39 family; [V] COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain.
 0.926
EDX70904.1
Type I secretion system ATPase subfamily, putative; [V] COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain.
 0.879
EDX75926.1
Peptidase, C39 family; [V] COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain.
 0.854
EDX73311.1
[MU] COG1538 Outer membrane protein.
  
 0.818
EDX77901.1
Hypothetical protein.
  
 0.818
EDX72186.1
Hypothetical protein; [V] COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain.
  
 0.785
EDX74243.1
Type I secretion target GGXGXDXXX repeat protein domain protein; [Q] COG2931 RTX toxins and related Ca2+-binding proteins.
 
  
 0.747
EDX74089.1
Type I secretion target GGXGXDXXX repeat protein domain protein; [Q] COG2931 RTX toxins and related Ca2+-binding proteins.
  
    0.734
EDX78650.1
Type I secretion target GGXGXDXXX repeat protein domain protein; [Q] COG2931 RTX toxins and related Ca2+-binding proteins.
  
    0.733
Your Current Organism:
Coleofasciculus chthonoplastes
NCBI taxonomy Id: 118168
Other names: C. chthonoplastes PCC 7420, Coleofasciculus chthonoplastes PCC 7420, Microcoleus chthonoplastes PCC 7420, Microcoleus sp. PCC 7420
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