STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDX76380.1[G] COG0380 Trehalose-6-phosphate synthase. (502 aa)    
Predicted Functional Partners:
EDX73962.1
Hypothetical protein; [R] COG0637 Predicted phosphatase/phosphohexomutase.
  
 
 0.973
EDX76611.1
Alpha amylase, catalytic domain subfamily, putative; [G] COG0366 Glycosidases.
 
 
 0.896
EDX72758.1
Glucose-1-phosphate adenylyltransferase; [G] COG0448 ADP-glucose pyrophosphorylase.
     
 0.851
EDX70705.1
Glycosyl hydrolase, family 15; [G] COG3387 Glucoamylase and related glycosyl hydrolases.
 
  
 0.789
EDX73977.1
Glycosyl hydrolase family 65 central catalytic domain; [G] COG1554 Trehalose and maltose hydrolases (possible phosphorylases).
    
 0.705
EDX72832.1
Nucleotidyl transferase superfamily; [M] COG1210 UDP-glucose pyrophosphorylase.
    
 0.703
gpsA
NAD-dependent glycerol-3-phosphate dehydrogenase C-terminal domain family protein; [C] COG0240 Glycerol-3-phosphate dehydrogenase; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
    
  0.694
EDX74841.1
[O] COG1764 Predicted redox protein, regulator of disulfide bond formation.
  
    0.680
EDX72523.1
[S] COG3551 Uncharacterized protein conserved in bacteria.
     
 0.671
EDX75198.1
Glycosyl transferase, group 2 family protein; [R] COG1216 Predicted glycosyltransferases.
     
 0.666
Your Current Organism:
Coleofasciculus chthonoplastes
NCBI taxonomy Id: 118168
Other names: C. chthonoplastes PCC 7420, Coleofasciculus chthonoplastes PCC 7420, Microcoleus chthonoplastes PCC 7420, Microcoleus sp. PCC 7420
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