STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDX76408.1Transposase, IS605 family; [L] COG0675 Transposase and inactivated derivatives. (415 aa)    
Predicted Functional Partners:
EDX77264.1
Transposase, IS605 family; [L] COG0675 Transposase and inactivated derivatives.
  
     0.761
EDX72694.1
Putative transposase DNA-binding domain family; [L] COG0675 Transposase and inactivated derivatives.
  
     0.761
EDX77998.1
Putative transposase DNA-binding domain family; [L] COG0675 Transposase and inactivated derivatives.
  
     0.761
EDX73786.1
Putative transposase DNA-binding domain family; [L] COG0675 Transposase and inactivated derivatives.
  
     0.755
EDX76002.1
Putative transposase DNA-binding domain family; [L] COG0675 Transposase and inactivated derivatives.
  
     0.633
EDX72684.1
Transposase, IS605 family; [L] COG0675 Transposase and inactivated derivatives.
  
     0.574
EDX75319.1
Putative transposase DNA-binding domain superfamily; [L] COG0675 Transposase and inactivated derivatives.
  
     0.555
EDX76561.1
[S] COG3216 Uncharacterized protein conserved in bacteria.
       0.479
EDX70809.1
Hypothetical protein; [L] COG1943 Transposase and inactivated derivatives.
  
     0.470
EDX75712.1
Hypothetical protein; [L] COG1943 Transposase and inactivated derivatives.
  
     0.445
Your Current Organism:
Coleofasciculus chthonoplastes
NCBI taxonomy Id: 118168
Other names: C. chthonoplastes PCC 7420, Coleofasciculus chthonoplastes PCC 7420, Microcoleus chthonoplastes PCC 7420, Microcoleus sp. PCC 7420
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.