Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EDX71124.1 | EDX72582.1 | MC7420_4311 | MC7420_2490 | Hypothetical protein; [G] COG2513 PEP phosphonomutase and related enzymes. | Beta-ketoacyl synthase, N-terminal domain protein; [Q] COG3321 Polyketide synthase modules and related proteins. | 0.526 |
| EDX71124.1 | EDX75326.1 | MC7420_4311 | MC7420_1244 | Hypothetical protein; [G] COG2513 PEP phosphonomutase and related enzymes. | [HE] COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.529 |
| EDX71124.1 | EDX75767.1 | MC7420_4311 | MC7420_6422 | Hypothetical protein; [G] COG2513 PEP phosphonomutase and related enzymes. | Pyruvate:ferredoxin (flavodoxin) oxidoreductase; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin. | 0.842 |
| EDX71124.1 | EDX76440.1 | MC7420_4311 | MC7420_4696 | Hypothetical protein; [G] COG2513 PEP phosphonomutase and related enzymes. | Aminotransferase, class V superfamily; [E] COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase. | 0.771 |
| EDX71723.1 | EDX72582.1 | MC7420_2389 | MC7420_2490 | Hypothetical protein; [G] COG2513 PEP phosphonomutase and related enzymes. | Beta-ketoacyl synthase, N-terminal domain protein; [Q] COG3321 Polyketide synthase modules and related proteins. | 0.526 |
| EDX71723.1 | EDX75326.1 | MC7420_2389 | MC7420_1244 | Hypothetical protein; [G] COG2513 PEP phosphonomutase and related enzymes. | [HE] COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.529 |
| EDX71723.1 | EDX75767.1 | MC7420_2389 | MC7420_6422 | Hypothetical protein; [G] COG2513 PEP phosphonomutase and related enzymes. | Pyruvate:ferredoxin (flavodoxin) oxidoreductase; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin. | 0.842 |
| EDX71723.1 | EDX76440.1 | MC7420_2389 | MC7420_4696 | Hypothetical protein; [G] COG2513 PEP phosphonomutase and related enzymes. | Aminotransferase, class V superfamily; [E] COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase. | 0.771 |
| EDX72491.1 | EDX72582.1 | MC7420_3563 | MC7420_2490 | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Beta-ketoacyl synthase, N-terminal domain protein; [Q] COG3321 Polyketide synthase modules and related proteins. | 0.848 |
| EDX72491.1 | EDX75326.1 | MC7420_3563 | MC7420_1244 | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | [HE] COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.733 |
| EDX72491.1 | EDX75767.1 | MC7420_3563 | MC7420_6422 | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Pyruvate:ferredoxin (flavodoxin) oxidoreductase; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin. | 0.903 |
| EDX72491.1 | EDX76440.1 | MC7420_3563 | MC7420_4696 | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Aminotransferase, class V superfamily; [E] COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase. | 0.798 |
| EDX72491.1 | gcvP | MC7420_3563 | MC7420_2006 | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.605 |
| EDX72491.1 | gcvT | MC7420_3563 | MC7420_2980 | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Glycine cleavage system T protein; The glycine cleavage system catalyzes the degradation of glycine. | 0.898 |
| EDX72491.1 | purD | MC7420_3563 | MC7420_3692 | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | [F] COG0151 Phosphoribosylamine-glycine ligase; Belongs to the GARS family. | 0.639 |
| EDX72582.1 | EDX71124.1 | MC7420_2490 | MC7420_4311 | Beta-ketoacyl synthase, N-terminal domain protein; [Q] COG3321 Polyketide synthase modules and related proteins. | Hypothetical protein; [G] COG2513 PEP phosphonomutase and related enzymes. | 0.526 |
| EDX72582.1 | EDX71723.1 | MC7420_2490 | MC7420_2389 | Beta-ketoacyl synthase, N-terminal domain protein; [Q] COG3321 Polyketide synthase modules and related proteins. | Hypothetical protein; [G] COG2513 PEP phosphonomutase and related enzymes. | 0.526 |
| EDX72582.1 | EDX72491.1 | MC7420_2490 | MC7420_3563 | Beta-ketoacyl synthase, N-terminal domain protein; [Q] COG3321 Polyketide synthase modules and related proteins. | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.848 |
| EDX72582.1 | EDX75326.1 | MC7420_2490 | MC7420_1244 | Beta-ketoacyl synthase, N-terminal domain protein; [Q] COG3321 Polyketide synthase modules and related proteins. | [HE] COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.574 |
| EDX72582.1 | EDX75767.1 | MC7420_2490 | MC7420_6422 | Beta-ketoacyl synthase, N-terminal domain protein; [Q] COG3321 Polyketide synthase modules and related proteins. | Pyruvate:ferredoxin (flavodoxin) oxidoreductase; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin. | 0.932 |
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