STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDX72673.1Conserved hypothetical protein; [R] COG1741 Pirin-related protein; Belongs to the pirin family. (232 aa)    
Predicted Functional Partners:
EDX77118.1
Alcohol dehydrogenase GroES-like domain family; [CR] COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases.
    
 0.854
EDX72696.1
[K] COG1733 Predicted transcriptional regulators.
     
 0.557
EDX77289.1
Condensation domain protein; [Q] COG1020 Non-ribosomal peptide synthetase modules and related proteins.
  
  
 0.519
EDX72580.1
KR domain family; [Q] COG3321 Polyketide synthase modules and related proteins.
  
  
 0.485
Your Current Organism:
Coleofasciculus chthonoplastes
NCBI taxonomy Id: 118168
Other names: C. chthonoplastes PCC 7420, Coleofasciculus chthonoplastes PCC 7420, Microcoleus chthonoplastes PCC 7420, Microcoleus sp. PCC 7420
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.