STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDX71997.1Hypothetical protein. (121 aa)    
Predicted Functional Partners:
EDX72006.1
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
       0.694
EDX74243.1
Type I secretion target GGXGXDXXX repeat protein domain protein; [Q] COG2931 RTX toxins and related Ca2+-binding proteins.
  
 
 0.536
EDX78548.1
Tetratricopeptide repeat domain protein; [M] COG0381 UDP-N-acetylglucosamine 2-epimerase.
  
 
 0.521
EDX77645.1
Hypothetical protein; [R] COG2319 FOG: WD40 repeat; WD domain, G-beta repeat.
  
 
 0.496
EDX72331.1
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
   
 
 0.481
EDX77779.1
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
   
 
 0.481
smc
Chromosome segregation protein SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family.
   
 
 0.481
EDX72460.1
Methyltransferase domain family.
   
 
 0.481
EDX73581.1
Hypothetical protein; [D] COG1196 Chromosome segregation ATPases; M protein repeat.
   
 
 0.481
EDX76559.1
Auxiliary transport protein, MFP family; [M] COG0845 Membrane-fusion protein.
   
 
 0.481
Your Current Organism:
Coleofasciculus chthonoplastes
NCBI taxonomy Id: 118168
Other names: C. chthonoplastes PCC 7420, Coleofasciculus chthonoplastes PCC 7420, Microcoleus chthonoplastes PCC 7420, Microcoleus sp. PCC 7420
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.