STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDX72005.1[S] COG4636 Uncharacterized protein conserved in cyanobacteria. (195 aa)    
Predicted Functional Partners:
EDX76587.1
[S] COG4636 Uncharacterized protein conserved in cyanobacteria.
  
     0.573
EDX75854.1
[S] COG4636 Uncharacterized protein conserved in cyanobacteria.
  
     0.560
ndhA
NADH dehydrogenase superfamily; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient.
       0.476
EDX73406.1
[S] COG4636 Uncharacterized protein conserved in cyanobacteria.
  
     0.456
EDX71946.1
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
       0.445
EDX72330.1
[S] COG4636 Uncharacterized protein conserved in cyanobacteria.
  
     0.442
EDX73056.1
[S] COG4636 Uncharacterized protein conserved in cyanobacteria.
  
     0.440
EDX73069.1
[S] COG4636 Uncharacterized protein conserved in cyanobacteria.
  
     0.407
Your Current Organism:
Coleofasciculus chthonoplastes
NCBI taxonomy Id: 118168
Other names: C. chthonoplastes PCC 7420, Coleofasciculus chthonoplastes PCC 7420, Microcoleus chthonoplastes PCC 7420, Microcoleus sp. PCC 7420
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