STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDX75925.1Glycosyl transferase, group 1 family protein; [M] COG0438 Glycosyltransferase. (442 aa)    
Predicted Functional Partners:
EDX77542.1
Nucleotidyl transferase family; [MJ] COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon).
  
 0.655
EDX77633.1
Capsular exopolysaccharide family protein; [D] COG0489 ATPases involved in chromosome partitioning.
 
 
 0.612
EDX73962.1
Hypothetical protein; [R] COG0637 Predicted phosphatase/phosphohexomutase.
  
 0.611
EDX78080.1
Glycosyl transferase, group 1 family protein; [M] COG0438 Glycosyltransferase.
  
     0.604
EDX74767.1
Bacterial sugar transferase, putative; [M] COG2148 Sugar transferases involved in lipopolysaccharide synthesis.
 
 
    0.593
EDX75934.1
Conserved hypothetical protein TIGR00488; [H] COG1713 Predicted HD superfamily hydrolase involved in NAD metabolism.
       0.586
EDX75394.1
[M] COG0381 UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
 
 
 0.585
EDX76611.1
Alpha amylase, catalytic domain subfamily, putative; [G] COG0366 Glycosidases.
    
 0.551
EDX71241.1
Bacterial sugar transferase, putative; [M] COG2148 Sugar transferases involved in lipopolysaccharide synthesis.
 
 
    0.543
EDX73334.1
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.540
Your Current Organism:
Coleofasciculus chthonoplastes
NCBI taxonomy Id: 118168
Other names: C. chthonoplastes PCC 7420, Coleofasciculus chthonoplastes PCC 7420, Microcoleus chthonoplastes PCC 7420, Microcoleus sp. PCC 7420
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