Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EDX75899.1 | EDX75942.1 | MC7420_5333 | MC7420_5376 | Hypothetical protein. | Hypothetical protein. | 0.444 |
EDX75899.1 | accD | MC7420_5333 | MC7420_5633 | Hypothetical protein. | acetyl-CoA carboxylase, carboxyl transferase, beta subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family. | 0.680 |
EDX75942.1 | EDX75899.1 | MC7420_5376 | MC7420_5333 | Hypothetical protein. | Hypothetical protein. | 0.444 |
EDX75942.1 | accD | MC7420_5376 | MC7420_5633 | Hypothetical protein. | acetyl-CoA carboxylase, carboxyl transferase, beta subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family. | 0.524 |
EDX75942.1 | psbV | MC7420_5376 | MC7420_5475 | Hypothetical protein. | Cytochrome c-550; Low-potential cytochrome c that plays a role in the oxygen- evolving complex of photosystem II. | 0.446 |
accD | EDX75899.1 | MC7420_5633 | MC7420_5333 | acetyl-CoA carboxylase, carboxyl transferase, beta subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family. | Hypothetical protein. | 0.680 |
accD | EDX75942.1 | MC7420_5633 | MC7420_5376 | acetyl-CoA carboxylase, carboxyl transferase, beta subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family. | Hypothetical protein. | 0.524 |
accD | psbV | MC7420_5633 | MC7420_5475 | acetyl-CoA carboxylase, carboxyl transferase, beta subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family. | Cytochrome c-550; Low-potential cytochrome c that plays a role in the oxygen- evolving complex of photosystem II. | 0.814 |
psbV | EDX75942.1 | MC7420_5475 | MC7420_5376 | Cytochrome c-550; Low-potential cytochrome c that plays a role in the oxygen- evolving complex of photosystem II. | Hypothetical protein. | 0.446 |
psbV | accD | MC7420_5475 | MC7420_5633 | Cytochrome c-550; Low-potential cytochrome c that plays a role in the oxygen- evolving complex of photosystem II. | acetyl-CoA carboxylase, carboxyl transferase, beta subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family. | 0.814 |