STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDX73837.1Glycosyl transferase, group 2 family protein; [M] COG1215 Glycosyltransferases, probably involved in cell wall biogenesis. (472 aa)    
Predicted Functional Partners:
EDX73942.1
Oxidoreductase, short chain dehydrogenase/reductase family; [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
   
 0.822
EDX71269.1
Cellulase (glycosyl hydrolase family 5), putative; [G] COG2730 Endoglucanase.
    
 0.708
EDX72582.1
Beta-ketoacyl synthase, N-terminal domain protein; [Q] COG3321 Polyketide synthase modules and related proteins.
   
 0.689
EDX72683.1
Cyclic diguanylate phosphodiesterase (EAL) domain, putative; [T] COG2200 FOG: EAL domain.
  
 
 0.652
EDX70582.1
PAS fold family; [T] COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.
  
 
 0.649
EDX71068.1
Polysaccharide deacetylase domain protein; [G] COG0726 Predicted xylanase/chitin deacetylase.
 
 
 0.598
EDX72461.1
Sulfotransferase domain superfamily; [R] COG0457 FOG: TPR repeat.
  
 
 0.584
EDX71926.1
Sulfotransferase domain superfamily; [R] COG0457 FOG: TPR repeat.
  
 
 0.584
EDX72170.1
Polysaccharide deacetylase domain protein; [G] COG0726 Predicted xylanase/chitin deacetylase.
  
 
 0.584
EDX72181.1
Cyclic diguanylate phosphodiesterase (EAL) domain protein; [T] COG2200 FOG: EAL domain.
  
 
 0.582
Your Current Organism:
Coleofasciculus chthonoplastes
NCBI taxonomy Id: 118168
Other names: C. chthonoplastes PCC 7420, Coleofasciculus chthonoplastes PCC 7420, Microcoleus chthonoplastes PCC 7420, Microcoleus sp. PCC 7420
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