STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDX73877.1S-layer domain protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. (700 aa)    
Predicted Functional Partners:
EDX74243.1
Type I secretion target GGXGXDXXX repeat protein domain protein; [Q] COG2931 RTX toxins and related Ca2+-binding proteins.
  
 0.965
EDX77523.1
Peptidase families S8 and S53 domain protein; [O] COG1404 Subtilisin-like serine proteases.
 
 0.934
EDX71269.1
Cellulase (glycosyl hydrolase family 5), putative; [G] COG2730 Endoglucanase.
    
 0.905
EDX76299.1
Hypothetical protein; [F] COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases.
   
 0.895
EDX78498.1
[M] COG0860 N-acetylmuramoyl-L-alanine amidase.
  
     0.700
EDX72389.1
Polysaccharide pyruvyl transferase superfamily; [KG] COG1940 Transcriptional regulator/sugar kinase.
  
     0.673
EDX73666.1
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
  
  0.670
EDX78553.1
FHA domain protein; [S] COG2339 Predicted membrane protein.
  
     0.647
EDX73200.1
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.640
EDX73813.1
Hypothetical protein.
       0.636
Your Current Organism:
Coleofasciculus chthonoplastes
NCBI taxonomy Id: 118168
Other names: C. chthonoplastes PCC 7420, Coleofasciculus chthonoplastes PCC 7420, Microcoleus chthonoplastes PCC 7420, Microcoleus sp. PCC 7420
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