STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDX74624.1Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. (171 aa)    
Predicted Functional Partners:
EDX71158.1
Hypothetical protein; [T] COG0784 FOG: CheY-like receiver; response regulator receiver domain, putative.
    
  0.702
EDX75913.1
ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein; [R] COG3899 Predicted ATPase.
    
  0.695
EDX75162.1
GAF domain protein; [T] COG0784 FOG: CheY-like receiver.
    
  0.683
EDX76824.1
ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein; [T] COG0642 Signal transduction histidine kinase.
    
  0.660
EDX72358.1
Radical SAM domain protein; [C] COG1032 Fe-S oxidoreductase.
  
 
 0.631
EDX75262.1
Radical SAM domain protein; [C] COG1032 Fe-S oxidoreductase.
  
 
 0.631
EDX71253.1
Radical SAM domain protein; [C] COG1032 Fe-S oxidoreductase.
  
 
 0.631
EDX77671.1
Radical SAM domain protein; [C] COG1032 Fe-S oxidoreductase.
  
 
 0.631
EDX72522.1
Radical SAM domain protein; [C] COG1032 Fe-S oxidoreductase.
  
 
 0.631
EDX73650.1
Radical SAM domain protein; [C] COG1032 Fe-S oxidoreductase.
  
 
 0.631
Your Current Organism:
Coleofasciculus chthonoplastes
NCBI taxonomy Id: 118168
Other names: C. chthonoplastes PCC 7420, Coleofasciculus chthonoplastes PCC 7420, Microcoleus chthonoplastes PCC 7420, Microcoleus sp. PCC 7420
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