STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDX75652.1ABC transporter, ATP-binding protein; [E] COG0019 Diaminopimelate decarboxylase. (256 aa)    
Predicted Functional Partners:
EDX75774.1
[P] COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters.
 
 0.996
EDX75815.1
CbiM; [P] COG0310 ABC-type Co2+ transport system, permease component.
 
 0.988
EDX72134.1
[P] COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters.
 
 0.976
EDX71119.1
[P] COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters.
 
 0.952
cbiM
Cobalamin biosynthesis protein CbiM; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import.
 
 0.945
EDX73662.1
BioY family; [R] COG1268 Uncharacterized conserved protein.
   
 0.933
EDX71065.1
PAS fold family; [T] COG0642 Signal transduction histidine kinase.
   
 
 0.825
EDX77094.1
Sirohydrochlorin cobaltochelatase, putative; [S] COG2138 Uncharacterized conserved protein.
    
 0.778
cbiN
Cobalt transport protein component CbiN; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import; Belongs to the CbiN family.
 
 
 0.778
EDX75890.1
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
 
  
 0.762
Your Current Organism:
Coleofasciculus chthonoplastes
NCBI taxonomy Id: 118168
Other names: C. chthonoplastes PCC 7420, Coleofasciculus chthonoplastes PCC 7420, Microcoleus chthonoplastes PCC 7420, Microcoleus sp. PCC 7420
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