STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDX75786.1Hypothetical protein; [L] COG3039 Transposase and inactivated derivatives, IS5 family. (161 aa)    
Predicted Functional Partners:
EDX75653.1
Transposase, IS4 family protein.
     0.979
EDX73973.1
Transposase, IS4 family protein.
 
     0.928
EDX73298.1
Transposase, IS4 family protein.
 
     0.927
EDX71086.1
Transposase, IS4 family protein.
 
     0.927
EDX77366.1
Transposase, IS4 family protein.
 
     0.927
EDX78738.1
Transposase, IS4 family protein.
 
     0.927
EDX76760.1
Transposase, IS4 family protein.
 
     0.925
EDX72422.1
Transposase, IS4 family protein.
 
     0.925
EDX75736.1
Transposase, IS4 family protein.
 
     0.925
EDX75836.1
Transposase, IS4 family protein.
 
     0.925
Your Current Organism:
Coleofasciculus chthonoplastes
NCBI taxonomy Id: 118168
Other names: C. chthonoplastes PCC 7420, Coleofasciculus chthonoplastes PCC 7420, Microcoleus chthonoplastes PCC 7420, Microcoleus sp. PCC 7420
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