STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDX73620.1Peptidase, M50 family protein; [M] COG0845 Membrane-fusion protein. (986 aa)    
Predicted Functional Partners:
EDX73311.1
[MU] COG1538 Outer membrane protein.
  
 0.847
EDX77901.1
Hypothetical protein.
  
 0.847
EDX78712.1
Hypothetical protein; [V] COG0841 Cation/multidrug efflux pump.
 
 0.775
EDX74093.1
DevC protein; [V] COG0577 ABC-type antimicrobial peptide transport system, permease component.
 
 
 0.714
EDX75321.1
RND transporter, HAE1/HME family, permease protein; [V] COG0841 Cation/multidrug efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
 0.713
EDX77706.1
RND transporter, HAE1 family; [V] COG0841 Cation/multidrug efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
 0.713
EDX73225.1
RND transporter, HAE1/HME family, permease protein; [V] COG0841 Cation/multidrug efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
 0.713
EDX76013.1
RND transporter, HAE1/HME family, permease protein; [V] COG0841 Cation/multidrug efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
 0.713
EDX75845.1
DevC protein; [V] COG0577 ABC-type antimicrobial peptide transport system, permease component.
 
 
 0.713
EDX78696.1
Hypothetical protein.
  
 0.713
Your Current Organism:
Coleofasciculus chthonoplastes
NCBI taxonomy Id: 118168
Other names: C. chthonoplastes PCC 7420, Coleofasciculus chthonoplastes PCC 7420, Microcoleus chthonoplastes PCC 7420, Microcoleus sp. PCC 7420
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.