STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDX73622.1TOBE domain family; [E] COG3842 ABC-type spermidine/putrescine transport systems, ATPase components; Belongs to the ABC transporter superfamily. (384 aa)    
Predicted Functional Partners:
EDX75464.1
ABC transporter, permease protein; [E] COG1176 ABC-type spermidine/putrescine transport system, permease component I.
 0.978
EDX72059.1
ABC transporter, permease protein, putative; [E] COG1177 ABC-type spermidine/putrescine transport system, permease component II.
 
 0.974
EDX75364.1
Bacterial extracellular solute-binding protein, putative; [E] COG0687 Spermidine/putrescine-binding periplasmic protein.
 
 0.942
EDX71026.1
[P] COG1178 ABC-type Fe3+ transport system, permease component.
 
 0.935
EDX74581.1
Hypothetical protein; [E] COG0687 Spermidine/putrescine-binding periplasmic protein.
 
 
 0.933
EDX72306.1
Bacterial extracellular solute-binding protein, putative; [P] COG1840 ABC-type Fe3+ transport system, periplasmic component.
 
 
 0.932
EDX77577.1
[P] COG4149 ABC-type molybdate transport system, permease component.
 
 
0.845
potA
Polyamine ABC transporter, ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
  
  
 
0.734
EDX76718.1
Conserved hypothetical protein; [Q] COG0767 ABC-type transport system involved in resistance to organic solvents, permease component; Belongs to the MlaE permease family.
   
  0.684
EDX76169.1
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
 
 0.675
Your Current Organism:
Coleofasciculus chthonoplastes
NCBI taxonomy Id: 118168
Other names: C. chthonoplastes PCC 7420, Coleofasciculus chthonoplastes PCC 7420, Microcoleus chthonoplastes PCC 7420, Microcoleus sp. PCC 7420
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