STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDX71775.1ABC transporter, permease protein; [EP] COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components. (371 aa)    
Predicted Functional Partners:
EDX78522.1
Nickel import ATP-binding protein NikD, putative; [R] COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase; Belongs to the ABC transporter superfamily.
 
 0.997
EDX78045.1
Nickel import ATP-binding protein NikD, putative; [R] COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase; Belongs to the ABC transporter superfamily.
 
 0.997
EDX73250.1
ABC transporter, permease protein; [EP] COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 0.986
EDX77863.1
ABC transporter, permease protein, putative; [EP] COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 0.982
EDX72284.1
ABC transporter, permease protein, putative; [EP] COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 0.978
EDX77375.1
Bacterial extracellular solute-binding protein, family 5; [E] COG0747 ABC-type dipeptide transport system, periplasmic component.
 
 0.968
EDX72309.1
Bacterial extracellular solute-binding protein, family 5; [E] COG0747 ABC-type dipeptide transport system, periplasmic component.
 0.961
EDX77688.1
Bacterial extracellular solute-binding protein, family 5; [E] COG0747 ABC-type dipeptide transport system, periplasmic component.
 0.958
EDX78471.1
ABC transporter, permease protein; [EP] COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
  
  
 
0.801
EDX71787.1
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
       0.772
Your Current Organism:
Coleofasciculus chthonoplastes
NCBI taxonomy Id: 118168
Other names: C. chthonoplastes PCC 7420, Coleofasciculus chthonoplastes PCC 7420, Microcoleus chthonoplastes PCC 7420, Microcoleus sp. PCC 7420
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.