STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDX71797.1Penicillin-binding protein, 1A family; [M] COG0744 Membrane carboxypeptidase (penicillin-binding protein). (746 aa)    
Predicted Functional Partners:
EDX75575.1
Penicillin-binding Protein dimerisation domain family; [M] COG0768 Cell division protein FtsI/penicillin-binding protein 2.
 
 
 0.916
EDX76814.1
PAS fold family; [T] COG0642 Signal transduction histidine kinase.
  
 0.879
EDX75095.1
PAS fold family; [T] COG0642 Signal transduction histidine kinase.
  
 0.879
EDX78539.1
Response regulator receiver domain protein; [T] COG0784 FOG: CheY-like receiver.
  
 0.865
EDX70989.1
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
 
 
 
 0.862
EDX75162.1
GAF domain protein; [T] COG0784 FOG: CheY-like receiver.
  
 
 0.847
EDX71158.1
Hypothetical protein; [T] COG0784 FOG: CheY-like receiver; response regulator receiver domain, putative.
  
 
 0.841
EDX75879.1
Penicillin-binding Protein dimerisation domain family; [M] COG0768 Cell division protein FtsI/penicillin-binding protein 2.
 
 
0.840
EDX70848.1
Response regulator receiver domain protein; [T] COG0784 FOG: CheY-like receiver.
  
 
 0.836
EDX76526.1
PAS fold family; [T] COG0642 Signal transduction histidine kinase.
  
 
 0.836
Your Current Organism:
Coleofasciculus chthonoplastes
NCBI taxonomy Id: 118168
Other names: C. chthonoplastes PCC 7420, Coleofasciculus chthonoplastes PCC 7420, Microcoleus chthonoplastes PCC 7420, Microcoleus sp. PCC 7420
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.