STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDX71802.1Hypothetical protein; [E] COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component. (244 aa)    
Predicted Functional Partners:
EDX71783.1
Hypothetical protein; [E] COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component.
  
  0.956
EDX71861.1
[E] COG4177 ABC-type branched-chain amino acid transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.871
EDX70848.1
Response regulator receiver domain protein; [T] COG0784 FOG: CheY-like receiver.
  
 0.838
EDX76526.1
PAS fold family; [T] COG0642 Signal transduction histidine kinase.
  
 0.838
EDX72708.1
PAS fold family; [T] COG0642 Signal transduction histidine kinase.
  
 0.838
EDX77984.1
PAS fold family; [T] COG2203 FOG: GAF domain.
  
 0.838
EDX75162.1
GAF domain protein; [T] COG0784 FOG: CheY-like receiver.
  
 0.833
EDX76814.1
PAS fold family; [T] COG0642 Signal transduction histidine kinase.
  
 0.832
EDX75095.1
PAS fold family; [T] COG0642 Signal transduction histidine kinase.
  
 0.832
EDX76978.1
PAS fold family; [T] COG0642 Signal transduction histidine kinase.
   
 0.830
Your Current Organism:
Coleofasciculus chthonoplastes
NCBI taxonomy Id: 118168
Other names: C. chthonoplastes PCC 7420, Coleofasciculus chthonoplastes PCC 7420, Microcoleus chthonoplastes PCC 7420, Microcoleus sp. PCC 7420
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.