STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDX78448.1Transporter, MotA/TolQ/ExbB proton channel family, putative; [U] COG0811 Biopolymer transport proteins. (196 aa)    
Predicted Functional Partners:
EDX73809.1
Transport energizing protein, ExbD/TolR family; [U] COG0848 Biopolymer transport protein.
 
 
 0.983
EDX72499.1
Transport energizing protein, ExbD/TolR family; [U] COG0848 Biopolymer transport protein.
 
 
 0.976
EDX75307.1
Transport energizing protein, ExbD/TolR family; [U] COG0848 Biopolymer transport protein.
 
 
 0.975
EDX71854.1
Transport energizing protein, ExbD/TolR family; [U] COG0848 Biopolymer transport protein.
 
 
 0.952
EDX77718.1
TonB family C-terminal domain protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
 
 0.914
EDX71881.1
Hypothetical protein.
  
 
 0.914
EDX78144.1
ABC transporter, ATP-binding protein, putative; [R] COG1137 ABC-type (unclassified) transport system, ATPase component.
 
   
 0.753
EDX78196.1
Putative permease, YjgP/YjgQ family; [R] COG0795 Predicted permeases.
  
     0.724
lpxA
acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.
  
   
 0.718
EDX73311.1
[MU] COG1538 Outer membrane protein.
  
   
 0.709
Your Current Organism:
Coleofasciculus chthonoplastes
NCBI taxonomy Id: 118168
Other names: C. chthonoplastes PCC 7420, Coleofasciculus chthonoplastes PCC 7420, Microcoleus chthonoplastes PCC 7420, Microcoleus sp. PCC 7420
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