STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDX78454.1Methyltransferase, UbiE/COQ5 family; [QR] COG0500 SAM-dependent methyltransferases. (207 aa)    
Predicted Functional Partners:
EDX77289.1
Condensation domain protein; [Q] COG1020 Non-ribosomal peptide synthetase modules and related proteins.
    
 0.848
EDX72582.1
Beta-ketoacyl synthase, N-terminal domain protein; [Q] COG3321 Polyketide synthase modules and related proteins.
    
 0.846
EDX72580.1
KR domain family; [Q] COG3321 Polyketide synthase modules and related proteins.
     
 0.736
EDX78301.1
Amino acid adenylation domain protein; [Q] COG1020 Non-ribosomal peptide synthetase modules and related proteins.
     
 0.713
EDX72552.1
Nonribosomal peptide synthase family; [Q] COG1020 Non-ribosomal peptide synthetase modules and related proteins.
     
 0.697
EDX71078.1
AMP-binding enzyme domain protein; [IQ] COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
     
 0.697
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
    
 0.684
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
     
 0.594
EDX72433.1
Methyltransferase domain family; [QR] COG0500 SAM-dependent methyltransferases.
  
     0.500
EDX71145.1
Amino acid adenylation domain protein; [Q] COG1020 Non-ribosomal peptide synthetase modules and related proteins.
     
 0.491
Your Current Organism:
Coleofasciculus chthonoplastes
NCBI taxonomy Id: 118168
Other names: C. chthonoplastes PCC 7420, Coleofasciculus chthonoplastes PCC 7420, Microcoleus chthonoplastes PCC 7420, Microcoleus sp. PCC 7420
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