STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDX78458.1Transcriptional regulator, ArsR family protein; [K] COG0640 Predicted transcriptional regulators. (108 aa)    
Predicted Functional Partners:
EDX78716.1
Arsenical-resistance protein; [P] COG0798 Arsenite efflux pump ACR3 and related permeases.
 
  
 0.650
EDX78474.1
Arsenate reductase, glutathione/glutaredoxin type; [T] COG0394 Protein-tyrosine-phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
 
  
 0.557
EDX75767.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin.
     
 0.448
EDX73112.1
[H] COG0340 Biotin-(acetyl-CoA carboxylase) ligase.
     
 0.443
ndk
Nucleoside diphosphate kinase superfamily; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
    
  0.436
EDX78441.1
Bacterial extracellular solute-binding protein, putative; [P] COG0226 ABC-type phosphate transport system, periplasmic component.
     
 0.434
EDX73453.1
Hydrolase, NUDIX family, putative; [LR] COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes.
 
  
  0.400
Your Current Organism:
Coleofasciculus chthonoplastes
NCBI taxonomy Id: 118168
Other names: C. chthonoplastes PCC 7420, Coleofasciculus chthonoplastes PCC 7420, Microcoleus chthonoplastes PCC 7420, Microcoleus sp. PCC 7420
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