STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDX78644.1Plant neutral invertase superfamily; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. (479 aa)    
Predicted Functional Partners:
EDX77683.1
Alpha-glucan phosphorylases subfamily; [G] COG0058 Glucan phosphorylase.
  
 0.828
EDX77823.1
Glycogen/starch/alpha-glucan phosphorylases subfamily; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
  
 0.828
EDX75124.1
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.755
ndhN
Hypothetical protein; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration.
  
     0.753
MC7420_85
[S] COG5474 Uncharacterized conserved protein.
  
     0.746
EDX73678.1
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.738
EDX71884.1
S-layer domain protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.718
EDX72104.1
Sucrose synthase; [M] COG0438 Glycosyltransferase.
  
  0.718
EDX76950.1
Glutaredoxin domain family protein; [OC] COG0526 Thiol-disulfide isomerase and thioredoxins.
  
     0.714
EDX72627.1
Alpha amylase, catalytic domain subfamily, putative; [G] COG0366 Glycosidases.
   
 0.702
Your Current Organism:
Coleofasciculus chthonoplastes
NCBI taxonomy Id: 118168
Other names: C. chthonoplastes PCC 7420, Coleofasciculus chthonoplastes PCC 7420, Microcoleus chthonoplastes PCC 7420, Microcoleus sp. PCC 7420
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