STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDX72100.1Hypothetical protein; [L] COG5421 Transposase. (540 aa)    
Predicted Functional Partners:
EDX72909.1
CRISPR-associated RAMP protein, Csx10 family; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.563
EDX72822.1
CRISPR-associated RAMP protein; [L] COG1337 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily).
  
     0.532
EDX72778.1
CRISPR-associated RAMP protein; [L] COG1337 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily).
  
     0.513
EDX72859.1
CRISPR-associated protein, Crm2 family, putative; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.498
EDX72823.1
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.482
EDX75832.1
Hypothetical protein; [R] COG0457 FOG: TPR repeat.
  
     0.477
EDX77123.1
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.473
EDX78079.1
Hypothetical protein; [V] COG1403 Restriction endonuclease.
  
     0.464
EDX77896.1
Hypothetical protein; [V] COG1403 Restriction endonuclease.
  
     0.459
EDX76096.1
Hypothetical protein; [V] COG1403 Restriction endonuclease.
  
     0.458
Your Current Organism:
Coleofasciculus chthonoplastes
NCBI taxonomy Id: 118168
Other names: C. chthonoplastes PCC 7420, Coleofasciculus chthonoplastes PCC 7420, Microcoleus chthonoplastes PCC 7420, Microcoleus sp. PCC 7420
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.