STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDX78182.1ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein; [T] COG0642 Signal transduction histidine kinase. (503 aa)    
Predicted Functional Partners:
EDX78143.1
[TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
  0.960
EDX71158.1
Hypothetical protein; [T] COG0784 FOG: CheY-like receiver; response regulator receiver domain, putative.
 
 0.942
EDX75162.1
GAF domain protein; [T] COG0784 FOG: CheY-like receiver.
  
0.905
EDX76978.1
PAS fold family; [T] COG0642 Signal transduction histidine kinase.
   
0.888
EDX72559.1
PAS fold family; [T] COG0642 Signal transduction histidine kinase.
   
0.888
EDX78539.1
Response regulator receiver domain protein; [T] COG0784 FOG: CheY-like receiver.
 
 
 0.851
EDX78219.1
PAS fold family; [R] COG0517 FOG: CBS domain.
 
0.849
EDX70848.1
Response regulator receiver domain protein; [T] COG0784 FOG: CheY-like receiver.
   
0.848
EDX76526.1
PAS fold family; [T] COG0642 Signal transduction histidine kinase.
   
0.848
EDX72708.1
PAS fold family; [T] COG0642 Signal transduction histidine kinase.
   
0.848
Your Current Organism:
Coleofasciculus chthonoplastes
NCBI taxonomy Id: 118168
Other names: C. chthonoplastes PCC 7420, Coleofasciculus chthonoplastes PCC 7420, Microcoleus chthonoplastes PCC 7420, Microcoleus sp. PCC 7420
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