STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDX78215.1Conserved domain protein, putative; [R] COG0730 Predicted permeases. (267 aa)    
Predicted Functional Partners:
EDX74289.1
Tetratricopeptide repeat domain protein; [R] COG0457 FOG: TPR repeat.
   
 
 0.511
EDX77696.1
Tetratricopeptide repeat domain protein; [R] COG0457 FOG: TPR repeat.
    
 
 0.493
EDX74172.1
Tetratricopeptide repeat domain protein; [R] COG0457 FOG: TPR repeat.
    
 
 0.493
EDX72283.1
Tetratricopeptide repeat domain protein; [R] COG0457 FOG: TPR repeat.
    
 
 0.493
EDX75320.1
Bacterial pre-peptidase C-terminal domain family; [O] COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain.
    
 
 0.467
EDX77070.1
Trypsin domain protein; [O] COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain.
    
 
 0.467
EDX77640.1
Trypsin domain protein; [O] COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain.
    
 
 0.467
EDX77711.1
Trypsin domain protein; [O] COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain.
    
 
 0.467
EDX77819.1
Trypsin domain protein.
    
 
 0.467
EDX72877.1
Trypsin domain protein; [O] COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain.
    
 
 0.467
Your Current Organism:
Coleofasciculus chthonoplastes
NCBI taxonomy Id: 118168
Other names: C. chthonoplastes PCC 7420, Coleofasciculus chthonoplastes PCC 7420, Microcoleus chthonoplastes PCC 7420, Microcoleus sp. PCC 7420
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