STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDX70897.1Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. (423 aa)    
Predicted Functional Partners:
EDX75298.1
Tetratricopeptide repeat domain protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
 
     0.775
EDX76032.1
PAS domain S-box protein.
  
     0.715
EDX76150.1
Pentapeptide repeat protein; [S] COG1357 Uncharacterized low-complexity proteins.
  
     0.713
EDX71269.1
Cellulase (glycosyl hydrolase family 5), putative; [G] COG2730 Endoglucanase.
    
 0.709
EDX77753.1
PBS lyase HEAT-like repeat domain protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.683
EDX74043.1
Conserved domain protein; [R] COG5006 Predicted permease, DMT superfamily.
  
     0.675
EDX76412.1
Sigma-70, region 4 family; [R] COG0457 FOG: TPR repeat.
  
     0.646
EDX75832.1
Hypothetical protein; [R] COG0457 FOG: TPR repeat.
  
     0.645
EDX74490.1
Hypothetical protein; [R] COG0457 FOG: TPR repeat.
  
     0.637
EDX77184.1
Tetratricopeptide repeat domain protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.628
Your Current Organism:
Coleofasciculus chthonoplastes
NCBI taxonomy Id: 118168
Other names: C. chthonoplastes PCC 7420, Coleofasciculus chthonoplastes PCC 7420, Microcoleus chthonoplastes PCC 7420, Microcoleus sp. PCC 7420
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.