STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDX72169.1Haemagglutination activity domain protein; [U] COG3210 Large exoproteins involved in heme utilization or adhesion. (2193 aa)    
Predicted Functional Partners:
EDX72168.1
Tetratricopeptide repeat domain protein; [S] COG4995 Uncharacterized protein conserved in bacteria.
 
     0.854
EDX71349.1
Outer membrane protein, OMP85 family, putative; [U] COG2831 Hemolysin activation/secretion protein.
  
  0.814
EDX77668.1
Outer membrane protein, OMP85 family, putative; [U] COG2831 Hemolysin activation/secretion protein.
  
  0.799
EDX75261.1
Outer membrane protein, OMP85 family, putative; [U] COG2831 Hemolysin activation/secretion protein.
  
  0.792
EDX72162.1
Hypothetical protein.
       0.773
EDX73334.1
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
  0.755
EDX72165.1
Outer membrane protein, OMP85 family, putative; [U] COG2831 Hemolysin activation/secretion protein.
  
  0.754
EDX76153.1
Outer membrane protein, OMP85 family, putative; [U] COG2831 Hemolysin activation/secretion protein.
  
  0.743
EDX76329.1
Tetratricopeptide repeat domain protein; [S] COG4995 Uncharacterized protein conserved in bacteria.
  
     0.742
EDX74662.1
Outer membrane protein, OMP85 family, putative; [U] COG2831 Hemolysin activation/secretion protein.
  
  0.739
Your Current Organism:
Coleofasciculus chthonoplastes
NCBI taxonomy Id: 118168
Other names: C. chthonoplastes PCC 7420, Coleofasciculus chthonoplastes PCC 7420, Microcoleus chthonoplastes PCC 7420, Microcoleus sp. PCC 7420
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.