STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000332175_00017Unannotated protein. (170 aa)    
Predicted Functional Partners:
GCA_000332175_03319
Unannotated protein.
    
   0.568
GCA_000332175_03961
Unannotated protein.
    
   0.568
GCA_000332175_05049
Unannotated protein.
    
   0.568
GCA_000332175_00016
Unannotated protein.
       0.508
GCA_000332175_00015
Unannotated protein.
       0.489
GCA_000332175_01734
Unannotated protein.
  
     0.483
GCA_000332175_00930
Unannotated protein.
  
    0.445
GCA_000332175_00018
Unannotated protein.
       0.430
GCA_000332175_05104
Unannotated protein.
  
     0.419
Your Current Organism:
Pseudanabaena sp. PCC6802
NCBI taxonomy Id: 118173
Other names: P. sp. PCC 6802, Pseudanabaena PCC6802, Pseudanabaena sp. PCC 6802
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.