STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000332175_02740Unannotated protein. (421 aa)    
Predicted Functional Partners:
GCA_000332175_02741
Unannotated protein.
 
 0.999
GCA_000332175_02527
Unannotated protein.
 
    0.708
GCA_000332175_04097
Unannotated protein.
   
  
 0.623
GCA_000332175_02916
Unannotated protein.
 
   
 0.597
GCA_000332175_02739
Unannotated protein.
       0.563
GCA_000332175_02526
Unannotated protein.
 
 
 0.551
GCA_000332175_05073
Unannotated protein.
 
  
 0.530
GCA_000332175_00560
Unannotated protein.
 
   
 0.524
GCA_000332175_00837
Unannotated protein.
 
   
 0.523
GCA_000332175_00733
Unannotated protein.
     
 0.516
Your Current Organism:
Pseudanabaena sp. PCC6802
NCBI taxonomy Id: 118173
Other names: P. sp. PCC 6802, Pseudanabaena PCC6802, Pseudanabaena sp. PCC 6802
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.