STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000332175_03837Unannotated protein. (252 aa)    
Predicted Functional Partners:
GCA_000332175_03835
Unannotated protein.
 
   
 0.934
GCA_000332175_04868
Unannotated protein.
 
   
 0.794
GCA_000332175_00557
Unannotated protein.
    
  0.777
GCA_000332175_01436
Unannotated protein.
    
  0.777
GCA_000332175_00740
Unannotated protein.
     
 0.735
GCA_000332175_03838
Unannotated protein.
 
     0.627
GCA_000332175_03836
Unannotated protein.
 
    
0.567
Your Current Organism:
Pseudanabaena sp. PCC6802
NCBI taxonomy Id: 118173
Other names: P. sp. PCC 6802, Pseudanabaena PCC6802, Pseudanabaena sp. PCC 6802
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.