STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000332175_03968Unannotated protein. (216 aa)    
Predicted Functional Partners:
GCA_000332175_04630
Unannotated protein.
 
 
 0.978
GCA_000332175_03969
Unannotated protein.
       0.799
GCA_000332175_04030
Unannotated protein.
 
  
 0.776
GCA_000332175_02909
Unannotated protein.
    
 0.689
GCA_000332175_04336
Unannotated protein.
    
 0.653
GCA_000332175_03846
Unannotated protein.
    
 0.494
GCA_000332175_03521
Unannotated protein.
    
 0.420
GCA_000332175_04028
Unannotated protein.
    
 0.420
GCA_000332175_04907
Unannotated protein.
    
 0.420
GCA_000332175_00740
Unannotated protein.
    
 0.417
Your Current Organism:
Pseudanabaena sp. PCC6802
NCBI taxonomy Id: 118173
Other names: P. sp. PCC 6802, Pseudanabaena PCC6802, Pseudanabaena sp. PCC 6802
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.