STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_04612Mitochondrial import receptor subunit TOM20. (104 aa)    
Predicted Functional Partners:
N307_06596
Mitochondrial import receptor subunit TOM70.
   
 0.996
N307_11543
Sterile alpha motif domain-containing protein 15.
   
 0.975
N307_10065
Voltage-dependent anion-selective channel protein 1.
   
 0.864
N307_06054
Voltage-dependent anion-selective channel protein 2.
   
 0.864
N307_07598
Voltage-dependent anion-selective channel protein 3.
   
 0.864
N307_00947
Ubiquitin carboxyl-terminal hydrolase.
    
 0.862
N307_09721
Mitochondrial import receptor subunit TOM6.
     
 0.860
N307_01401
Protein kinase domain-containing protein.
    
 0.852
N307_11851
Metaxin-3.
    
 0.816
N307_14995
Mitochondrial import inner membrane translocase subunit Tim10.
   
  
 0.759
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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