STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_12863Rho guanine nucleotide exchange factor 10. (1338 aa)    
Predicted Functional Partners:
N307_03549
Stimulator of interferon genes protein.
   
 0.738
N307_09594
Tumor suppressor p53-binding protein 1.
    
 0.649
N307_14381
Rho guanine nucleotide exchange factor 12.
    
 0.573
N307_00770
Cell division control protein 42.
   
 0.540
N307_12905
Guanine nucleotide-binding protein subunit alpha-13.
    
 0.515
N307_00100
Rho-related GTP-binding protein RhoC.
   
 0.500
N307_04002
Rho-related GTP-binding protein RhoB.
   
 0.500
N307_02992
Intersectin-2.
    
 
0.490
N307_12706
Intersectin-1.
    
 
0.490
N307_07728
Guanine nucleotide-binding protein subunit alpha-12.
    
  0.488
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.