STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_10068S-phase kinase-associated protein 1; Belongs to the SKP1 family. (163 aa)    
Predicted Functional Partners:
N307_02534
Cullin-3; Belongs to the cullin family.
   
 0.999
N307_05079
RING-box protein 1.
   
 0.999
N307_09764
S-phase kinase-associated protein 2.
    
 0.999
N307_00894
Lysine-specific demethylase 2B.
   
 0.999
N307_08774
F-box/WD repeat-containing protein 1A.
    
 0.998
N307_00746
F-box/WD repeat-containing protein 11.
    
 0.994
N307_10216
NF-kappa-B inhibitor alpha.
    
 0.991
N307_08047
F-box/LRR-repeat protein 5.
    
 0.989
N307_10497
Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.
    
 0.989
N307_03923
F-box/LRR-repeat protein 3.
   
 0.988
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.