STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_10102Dual specificity protein kinase CLK4; Belongs to the protein kinase superfamily. (477 aa)    
Predicted Functional Partners:
N307_09406
SRSF protein kinase 1.
    
 
0.557
N307_11916
SRSF protein kinase 2.
    
 
0.557
N307_00262
Putative ATP-dependent RNA helicase YTHDC2.
   
 
 0.409
N307_13116
Serine/arginine-rich splicing factor 2.
    
 
 0.405
N307_05688
Transformer-2 protein beta.
   
 
 0.404
N307_09433
Transformer-2 protein alpha.
   
 
 0.404
N307_14710
UPF0471 protein C1orf63.
   
   0.400
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.