STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_07641Zinc finger protein 598. (747 aa)    
Predicted Functional Partners:
N307_06442
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
    
 
 0.815
N307_08179
PERQ amino acid-rich with GYF domain-containing protein 2.
    
 
 0.756
N307_13685
Activating signal cointegrator 1 complex subunit 3.
    
 
 0.727
N307_01925
40S ribosomal protein S20.
    
 
 0.703
N307_09704
40S ribosomal protein S10.
    
 
 0.675
N307_10571
WD repeat-containing protein 31.
    
 
 0.666
N307_05246
Eukaryotic translation initiation factor 4E type 2; Belongs to the eukaryotic initiation factor 4E family.
    
 
 0.654
N307_00985
Translational activator GCN1.
    
 
 0.642
N307_06963
OTU domain-containing protein 4.
   
 
 0.596
N307_07646
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
    
 
 0.594
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.