STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_03812Fibrinogen gamma chain. (186 aa)    
Predicted Functional Partners:
N307_03809
Fibrinogen C-terminal domain-containing protein.
   
0.999
N307_03811
Fibrinogen alpha chain.
 
 
 0.999
N307_03810
Fibrinogen alpha chain.
  
0.997
N307_01636
Prothrombin; Thrombin, which cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII, XIII, and, in complex with thrombomodulin, protein C. Functions in blood homeostasis, inflammation and wound healing; Belongs to the peptidase S1 family.
   
 0.996
N307_05421
Integrin beta.
    
 0.903
N307_05273
Uncharacterized protein.
   
 0.902
N307_11616
Integrin alpha-8; Belongs to the integrin alpha chain family.
    
 0.863
N307_02424
Lipocln_cytosolic_FA-bd_dom domain-containing protein.
   
  
 0.862
N307_12910
Beta-2-glycoprotein 1.
   
 0.862
N307_14099
Heparin cofactor 2; Belongs to the serpin family.
   
 0.850
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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