STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_02047Amine oxidase. (506 aa)    
Predicted Functional Partners:
N307_04610
AT-rich interactive domain-containing protein 4B.
   
 
 0.937
N307_08484
AT-rich interactive domain-containing protein 4A.
   
 
 0.937
N307_13264
Putative oxidoreductase GLYR1.
    
 
 0.931
N307_14121
Catechol O-methyltransferase.
    
 0.898
N307_13960
Aromatic-L-amino-acid decarboxylase.
    
 0.883
N307_02526
Dopamine beta-hydroxylase.
     
 0.877
N307_03861
REST corepressor 1.
    
 0.856
N307_14780
REST corepressor 3.
    
 0.856
N307_13125
Serotonin N-acetyltransferase.
     
 0.851
N307_04706
4-trimethylaminobutyraldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
 
 0.847
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.