STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_11145TBC1 domain family member 2B. (896 aa)    
Predicted Functional Partners:
N307_08446
Protein NRDE2.
    
 0.841
N307_15243
WD repeat-containing protein 90.
    
  0.810
N307_01574
Serine/threonine-protein kinase PLK1.
    
 0.750
N307_12155
Serine/threonine-protein kinase PLK.
    
 0.750
N307_04750
Serine/threonine-protein kinase PLK3.
    
 0.750
N307_01163
Ras-related protein Rab-7a.
    
 0.737
N307_10484
EF-hand domain-containing family member B.
    
   0.655
N307_07589
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.
    
   0.639
N307_00723
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.
    
   0.639
N307_11205
Dual specificity protein phosphatase CDC14B.
    
 
 0.633
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.