STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_07702ATP-sensitive inward rectifier potassium channel 12. (425 aa)    
Predicted Functional Partners:
N307_05111
Inward rectifier potassium channel 4.
  
  
0.765
N307_06973
Endothelin-1 receptor; Belongs to the G-protein coupled receptor 1 family.
     
 0.742
N307_00631
Guanine nucleotide-binding protein subunit beta-5.
    
  0.660
N307_09257
Potassium voltage-gated channel subfamily KQT member 1; Belongs to the potassium channel family.
   
 
 0.647
N307_03078
Potassium voltage-gated channel subfamily KQT member 1; Belongs to the potassium channel family.
   
 
 0.647
N307_05297
Guanine nucleotide-binding protein subunit beta-4.
    
 0.635
N307_10677
Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-3.
    
 0.624
N307_04606
Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
    
  0.618
N307_10921
Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
    
  0.618
N307_08613
Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-5.
    
  0.615
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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