STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_10178TBC1 domain family member 22A. (518 aa)    
Predicted Functional Partners:
N307_07863
Ras-related protein Rab-1A.
    
 
 0.775
N307_10438
Golgi resident protein GCP60.
    
 
 0.716
N307_12703
Uncharacterized protein.
    
   0.689
N307_10579
Uncharacterized protein.
   
   0.667
N307_03079
MRP-S28 domain-containing protein.
    
   0.656
N307_07868
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
    
   0.655
N307_09533
Uncharacterized protein.
    
   0.655
N307_05295
Uncharacterized protein.
    
   0.655
N307_13901
Uncharacterized protein.
    
   0.655
N307_02740
Uncharacterized protein.
    
   0.655
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.