Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
N307_02347 | N307_08386 | A0A093GQQ7 | A0A093FXX1 | Proteasome maturation protein. | Activated RNA polymerase II transcriptional coactivator p15. | 0.428 |
N307_06300 | N307_08386 | A0A093GAH3 | A0A093FXX1 | Ribosome-binding protein 1. | Activated RNA polymerase II transcriptional coactivator p15. | 0.450 |
N307_06300 | N307_08638 | A0A093GAH3 | A0A093GKH7 | Ribosome-binding protein 1. | Transcription initiation factor IIB. | 0.836 |
N307_07044 | N307_08386 | A0A093H0W0 | A0A093FXX1 | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at the specific target site 5'-[CT]CCTTp site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(3'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 5'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand thus r [...] | Activated RNA polymerase II transcriptional coactivator p15. | 0.427 |
N307_08386 | N307_02347 | A0A093FXX1 | A0A093GQQ7 | Activated RNA polymerase II transcriptional coactivator p15. | Proteasome maturation protein. | 0.428 |
N307_08386 | N307_06300 | A0A093FXX1 | A0A093GAH3 | Activated RNA polymerase II transcriptional coactivator p15. | Ribosome-binding protein 1. | 0.450 |
N307_08386 | N307_07044 | A0A093FXX1 | A0A093H0W0 | Activated RNA polymerase II transcriptional coactivator p15. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at the specific target site 5'-[CT]CCTTp site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(3'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 5'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand thus r [...] | 0.427 |
N307_08386 | N307_08638 | A0A093FXX1 | A0A093GKH7 | Activated RNA polymerase II transcriptional coactivator p15. | Transcription initiation factor IIB. | 0.579 |
N307_08386 | N307_10603 | A0A093FXX1 | A0A093IJQ2 | Activated RNA polymerase II transcriptional coactivator p15. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at the specific target site 5'-[CT]CCTTp site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(3'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 5'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand thus r [...] | 0.427 |
N307_08386 | N307_13514 | A0A093FXX1 | A0A093GKR2 | Activated RNA polymerase II transcriptional coactivator p15. | Small acidic protein. | 0.589 |
N307_08638 | N307_06300 | A0A093GKH7 | A0A093GAH3 | Transcription initiation factor IIB. | Ribosome-binding protein 1. | 0.836 |
N307_08638 | N307_08386 | A0A093GKH7 | A0A093FXX1 | Transcription initiation factor IIB. | Activated RNA polymerase II transcriptional coactivator p15. | 0.579 |
N307_10603 | N307_08386 | A0A093IJQ2 | A0A093FXX1 | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at the specific target site 5'-[CT]CCTTp site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(3'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 5'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand thus r [...] | Activated RNA polymerase II transcriptional coactivator p15. | 0.427 |
N307_13514 | N307_08386 | A0A093GKR2 | A0A093FXX1 | Small acidic protein. | Activated RNA polymerase II transcriptional coactivator p15. | 0.589 |