STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_07892Transmembrane protein 17. (172 aa)    
Predicted Functional Partners:
N307_07668
B9 domain-containing protein 1.
    
 
 0.513
N307_08046
Coiled-coil and C2 domain-containing protein 2A.
    
 
 0.506
N307_12952
Transmembrane protein 231.
    
 
 0.488
N307_07761
Transmembrane protein 237.
      
 0.426
N307_14429
Meckelin.
      
 0.420
N307_01485
Inactive polyglycylase TTLL10.
      
 0.408
N307_06569
Nephrocystin-4.
      
 0.402
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.